Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MYLKP1-201ENST00000509077 1580 ntBASIC20.39■□□□□ 0.85
TPM2P07951 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.39■□□□□ 0.85
TPM2P07951 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.39■□□□□ 0.85
TPM2P07951 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.39■□□□□ 0.85
TPM2P07951 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM2P07951 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM2P07951 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 MIR6786-201ENST00000616843 113 ntBASIC20.39■□□□□ 0.85
TPM2P07951 AC130371.2-201ENST00000619443 611 ntBASIC20.39■□□□□ 0.85
TPM2P07951 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
TPM2P07951 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TPM2P07951 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.39■□□□□ 0.85
TPM2P07951 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TPM2P07951 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TPM2P07951 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.38■□□□□ 0.85
TPM2P07951 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.38■□□□□ 0.85
TPM2P07951 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 FAM197Y4-202ENST00000622692 608 ntBASIC20.38■□□□□ 0.85
TPM2P07951 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 AL109659.2-201ENST00000606809 1674 ntBASIC20.38■□□□□ 0.85
TPM2P07951 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TPM2P07951 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TPM2P07951 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.38■□□□□ 0.85
TPM2P07951 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 FSCN1P1-201ENST00000568912 1481 ntBASIC20.37■□□□□ 0.85
TPM2P07951 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM2P07951 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM2P07951 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
TPM2P07951 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM2P07951 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TPM2P07951 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TPM2P07951 RPPH1-201ENST00000516869 333 ntBASIC20.37■□□□□ 0.85
TPM2P07951 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.37■□□□□ 0.85
TPM2P07951 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM2P07951 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM2P07951 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM2P07951 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM2P07951 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM2P07951 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM2P07951 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM2P07951 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM2P07951 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TPM2P07951 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TPM2P07951 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM2P07951 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
TPM2P07951 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TPM2P07951 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM2P07951 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM2P07951 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms