Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 AC132938.6-201ENST00000623828 1655 ntBASIC16.22■□□□□ 0.19
HMGN1P05114 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.22■□□□□ 0.19
HMGN1P05114 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGN1P05114 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 AC233702.5-201ENST00000584107 538 ntBASIC16.22■□□□□ 0.19
HMGN1P05114 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 AC026471.5-201ENST00000615068 467 ntBASIC16.22■□□□□ 0.19
HMGN1P05114 AC116562.4-202ENST00000641738 218 ntBASIC16.22■□□□□ 0.19
HMGN1P05114 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGN1P05114 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HMGN1P05114 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.22■□□□□ 0.19
HMGN1P05114 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMGN1P05114 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 AC092338.2-201ENST00000568827 1415 ntBASIC16.21■□□□□ 0.19
HMGN1P05114 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
HMGN1P05114 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
HMGN1P05114 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
HMGN1P05114 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGN1P05114 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 AL121761.2-201ENST00000598007 1648 ntBASIC16.21■□□□□ 0.19
HMGN1P05114 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.21■□□□□ 0.19
HMGN1P05114 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.21■□□□□ 0.19
HMGN1P05114 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HMGN1P05114 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.21■□□□□ 0.19
HMGN1P05114 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HMGN1P05114 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMGN1P05114 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMGN1P05114 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.21■□□□□ 0.18
HMGN1P05114 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMGN1P05114 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMGN1P05114 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.21■□□□□ 0.18
HMGN1P05114 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMGN1P05114 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMGN1P05114 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGN1P05114 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGN1P05114 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.2■□□□□ 0.18
HMGN1P05114 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HMGN1P05114 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.2■□□□□ 0.18
HMGN1P05114 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HMGN1P05114 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGN1P05114 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HMGN1P05114 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.2■□□□□ 0.18
HMGN1P05114 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMGN1P05114 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMGN1P05114 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms