Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MYCNP04198 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MYCNP04198 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MYCNP04198 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
MYCNP04198 RCN1P2-201ENST00000398357 915 ntBASIC20.51■□□□□ 0.87
MYCNP04198 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MYCNP04198 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC20.51■□□□□ 0.87
MYCNP04198 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.51■□□□□ 0.87
MYCNP04198 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.51■□□□□ 0.87
MYCNP04198 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC20.51■□□□□ 0.87
MYCNP04198 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC20.51■□□□□ 0.87
MYCNP04198 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.51■□□□□ 0.87
MYCNP04198 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.51■□□□□ 0.87
MYCNP04198 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
MYCNP04198 AC068620.4-201ENST00000636730 1182 ntBASIC20.51■□□□□ 0.87
MYCNP04198 FP475955.4-201ENST00000623131 1990 ntBASIC20.51■□□□□ 0.87
MYCNP04198 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.51■□□□□ 0.87
MYCNP04198 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.51■□□□□ 0.87
MYCNP04198 KRT8P50-201ENST00000562022 1438 ntBASIC20.51■□□□□ 0.87
MYCNP04198 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MYCNP04198 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MYCNP04198 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MYCNP04198 KRT89P-201ENST00000620027 1478 ntBASIC20.5■□□□□ 0.87
MYCNP04198 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.5■□□□□ 0.87
MYCNP04198 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.5■□□□□ 0.87
MYCNP04198 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MYCNP04198 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
MYCNP04198 FAM220CP-201ENST00000395253 831 ntBASIC20.5■□□□□ 0.87
MYCNP04198 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
MYCNP04198 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC20.5■□□□□ 0.87
MYCNP04198 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 AC068987.2-201ENST00000565518 896 ntBASIC20.5■□□□□ 0.87
MYCNP04198 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
MYCNP04198 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 AC005785.2-201ENST00000624655 631 ntBASIC20.5■□□□□ 0.87
MYCNP04198 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MYCNP04198 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.5■□□□□ 0.87
MYCNP04198 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.5■□□□□ 0.87
MYCNP04198 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MYCNP04198 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.49■□□□□ 0.87
MYCNP04198 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.49■□□□□ 0.87
MYCNP04198 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.49■□□□□ 0.87
MYCNP04198 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
MYCNP04198 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MYCNP04198 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.49■□□□□ 0.87
MYCNP04198 FAM220BP-201ENST00000377689 816 ntBASIC20.49■□□□□ 0.87
MYCNP04198 SFR1P2-201ENST00000421841 730 ntBASIC20.49■□□□□ 0.87
MYCNP04198 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.49■□□□□ 0.87
MYCNP04198 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.49■□□□□ 0.87
MYCNP04198 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC20.49■□□□□ 0.87
MYCNP04198 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MYCNP04198 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.49■□□□□ 0.87
MYCNP04198 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.49■□□□□ 0.87
MYCNP04198 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC20.49■□□□□ 0.87
MYCNP04198 AL162574.2-201ENST00000614618 657 ntBASIC20.49■□□□□ 0.87
MYCNP04198 AC068587.9-201ENST00000641814 219 ntBASIC20.49■□□□□ 0.87
MYCNP04198 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MYCNP04198 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC20.49■□□□□ 0.87
MYCNP04198 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.49■□□□□ 0.87
MYCNP04198 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.49■□□□□ 0.87
MYCNP04198 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms