Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.25■□□□□ 0.51
MT-ND3P03897 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MT-ND3P03897 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.25■□□□□ 0.51
MT-ND3P03897 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND3P03897 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND3P03897 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MT-ND3P03897 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.24■□□□□ 0.51
MT-ND3P03897 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
MT-ND3P03897 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
MT-ND3P03897 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND3P03897 AC007663.1-201ENST00000438948 1240 ntBASIC18.24■□□□□ 0.51
MT-ND3P03897 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.24■□□□□ 0.51
MT-ND3P03897 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.24■□□□□ 0.51
MT-ND3P03897 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.24■□□□□ 0.51
MT-ND3P03897 AC006011.2-201ENST00000621313 1158 ntBASIC18.24■□□□□ 0.51
MT-ND3P03897 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.24■□□□□ 0.51
MT-ND3P03897 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MT-ND3P03897 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MT-ND3P03897 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MT-ND3P03897 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MT-ND3P03897 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.23■□□□□ 0.51
MT-ND3P03897 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-ND3P03897 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MT-ND3P03897 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MT-ND3P03897 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.23■□□□□ 0.51
MT-ND3P03897 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 AL353719.1-201ENST00000566847 864 ntBASIC18.23■□□□□ 0.51
MT-ND3P03897 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-ND3P03897 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 AL023806.1-201ENST00000603994 1649 ntBASIC18.23■□□□□ 0.51
MT-ND3P03897 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MT-ND3P03897 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MT-ND3P03897 AC092338.2-201ENST00000568827 1415 ntBASIC18.23■□□□□ 0.51
MT-ND3P03897 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.23■□□□□ 0.51
MT-ND3P03897 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.22■□□□□ 0.51
MT-ND3P03897 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MT-ND3P03897 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
MT-ND3P03897 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MT-ND3P03897 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND3P03897 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 INGX-201ENST00000359239 846 ntBASIC18.22■□□□□ 0.51
MT-ND3P03897 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.22■□□□□ 0.51
MT-ND3P03897 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.22■□□□□ 0.51
MT-ND3P03897 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 MIR3180-5-201ENST00000583743 153 ntBASIC18.22■□□□□ 0.51
MT-ND3P03897 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MT-ND3P03897 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MT-ND3P03897 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND3P03897 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms