Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TRBV12-3P01733 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV12-3P01733 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.83□□□□□ -0.19
TRBV12-3P01733 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 LINC00265-3P-201ENST00000447588 903 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 TPSP2-201ENST00000561760 610 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 MIR3180-1-201ENST00000580374 94 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 MIR3180-3-201ENST00000584616 94 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 AC022898.2-201ENST00000616822 1312 ntBASIC13.83□□□□□ -0.2
TRBV12-3P01733 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TRBV12-3P01733 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV12-3P01733 AC067852.2-201ENST00000590513 2313 ntBASIC13.82□□□□□ -0.2
TRBV12-3P01733 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 FZD10-202ENST00000539839 3282 ntBASIC13.82□□□□□ -0.2
TRBV12-3P01733 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 AC090340.1-201ENST00000620778 4980 ntBASIC13.82□□□□□ -0.2
TRBV12-3P01733 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 TOB2P1-201ENST00000469761 992 ntBASIC13.82□□□□□ -0.2
TRBV12-3P01733 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 AP005901.3-202ENST00000581653 237 ntBASIC13.82□□□□□ -0.2
TRBV12-3P01733 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV12-3P01733 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV12-3P01733 AC068880.1-201ENST00000507289 2297 ntBASIC13.81□□□□□ -0.2
TRBV12-3P01733 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV12-3P01733 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV12-3P01733 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV12-3P01733 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV12-3P01733 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV12-3P01733 KRT18P55-202ENST00000578578 1546 ntBASIC13.81□□□□□ -0.2
TRBV12-3P01733 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms