Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
TRUB2O95900 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.74■□□□□ 0.59
TRUB2O95900 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 DRAXINP1-201ENST00000437611 948 ntBASIC18.74■□□□□ 0.59
TRUB2O95900 MTCL1P1-201ENST00000446207 792 ntBASIC18.74■□□□□ 0.59
TRUB2O95900 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.74■□□□□ 0.59
TRUB2O95900 TPSP2-201ENST00000561760 610 ntBASIC18.74■□□□□ 0.59
TRUB2O95900 AC092119.3-201ENST00000612618 583 ntBASIC18.74■□□□□ 0.59
TRUB2O95900 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRUB2O95900 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRUB2O95900 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.74■□□□□ 0.59
TRUB2O95900 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.74■□□□□ 0.59
TRUB2O95900 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB2O95900 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRUB2O95900 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRUB2O95900 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRUB2O95900 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.73■□□□□ 0.59
TRUB2O95900 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.73■□□□□ 0.59
TRUB2O95900 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.73■□□□□ 0.59
TRUB2O95900 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.73■□□□□ 0.59
TRUB2O95900 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TRUB2O95900 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.73■□□□□ 0.59
TRUB2O95900 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRUB2O95900 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.73■□□□□ 0.59
TRUB2O95900 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB2O95900 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRUB2O95900 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRUB2O95900 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.72■□□□□ 0.59
TRUB2O95900 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 AL845331.1-201ENST00000424978 1190 ntBASIC18.72■□□□□ 0.59
TRUB2O95900 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 AC112698.1-201ENST00000510299 916 ntBASIC18.72■□□□□ 0.59
TRUB2O95900 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.72■□□□□ 0.59
TRUB2O95900 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.72■□□□□ 0.59
TRUB2O95900 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 AC092329.2-201ENST00000598402 547 ntBASIC18.72■□□□□ 0.59
TRUB2O95900 AL353801.3-201ENST00000609898 542 ntBASIC18.72■□□□□ 0.59
TRUB2O95900 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TRUB2O95900 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
TRUB2O95900 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRUB2O95900 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRUB2O95900 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB2O95900 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.71■□□□□ 0.59
TRUB2O95900 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
TRUB2O95900 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.71■□□□□ 0.59
TRUB2O95900 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.59
TRUB2O95900 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRUB2O95900 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms