Protein–RNA interactions for Protein: O95405

ZFYVE9, Zinc finger FYVE domain-containing protein 9, humanhuman

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE9O95405 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZFYVE9O95405 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.21■■□□□ 1.63
ZFYVE9O95405 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ZFYVE9O95405 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
ZFYVE9O95405 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC25.2■■□□□ 1.63
ZFYVE9O95405 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 FAM58CP-201ENST00000435741 640 ntBASIC25.2■■□□□ 1.62
ZFYVE9O95405 LHX6-205ENST00000464484 666 ntTSL 2 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ZFYVE9O95405 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 AC092902.6-201ENST00000641783 218 ntBASIC25.2■■□□□ 1.62
ZFYVE9O95405 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
ZFYVE9O95405 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 AP002414.1-201ENST00000391405 1147 ntBASIC25.19■■□□□ 1.62
ZFYVE9O95405 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 CBR1-202ENST00000399191 838 ntTSL 3 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 AC092364.2-202ENST00000597012 1073 ntBASIC25.19■■□□□ 1.62
ZFYVE9O95405 AL353135.1-201ENST00000606729 504 ntBASIC25.19■■□□□ 1.62
ZFYVE9O95405 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ZFYVE9O95405 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC25.19■■□□□ 1.62
ZFYVE9O95405 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE9O95405 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE9O95405 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE9O95405 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE9O95405 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE9O95405 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ZFYVE9O95405 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
ZFYVE9O95405 BCAR1-209ENST00000546196 1340 ntBASIC25.17■■□□□ 1.62
ZFYVE9O95405 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
ZFYVE9O95405 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC25.17■■□□□ 1.62
ZFYVE9O95405 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
ZFYVE9O95405 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
ZFYVE9O95405 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
ZFYVE9O95405 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 ACTG1P14-201ENST00000446382 1122 ntBASIC25.17■■□□□ 1.62
ZFYVE9O95405 SIGLEC30P-201ENST00000455569 941 ntBASIC25.17■■□□□ 1.62
ZFYVE9O95405 STK25P1-201ENST00000585406 838 ntBASIC25.17■■□□□ 1.62
ZFYVE9O95405 AC018445.3-201ENST00000624177 1945 ntBASIC25.17■■□□□ 1.62
ZFYVE9O95405 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
ZFYVE9O95405 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ZFYVE9O95405 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ZFYVE9O95405 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms