Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.82■□□□□ 0.76
CLSTN1O94985 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.82■□□□□ 0.76
CLSTN1O94985 MIR149-201ENST00000384879 89 ntBASIC19.82■□□□□ 0.76
CLSTN1O94985 RASA4DP-201ENST00000460726 1199 ntBASIC19.82■□□□□ 0.76
CLSTN1O94985 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.82■□□□□ 0.76
CLSTN1O94985 AC022616.7-201ENST00000525383 220 ntBASIC19.82■□□□□ 0.76
CLSTN1O94985 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.82■□□□□ 0.76
CLSTN1O94985 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.82■□□□□ 0.76
CLSTN1O94985 MIR3917-201ENST00000580971 93 ntBASIC19.82■□□□□ 0.76
CLSTN1O94985 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.82■□□□□ 0.76
CLSTN1O94985 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLSTN1O94985 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLSTN1O94985 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CLSTN1O94985 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.82■□□□□ 0.76
CLSTN1O94985 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLSTN1O94985 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.81■□□□□ 0.76
CLSTN1O94985 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CLSTN1O94985 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 SPDYE15P-201ENST00000424157 909 ntBASIC19.81■□□□□ 0.76
CLSTN1O94985 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.81■□□□□ 0.76
CLSTN1O94985 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 HOMER2P1-201ENST00000455653 964 ntBASIC19.81■□□□□ 0.76
CLSTN1O94985 KRT18P41-201ENST00000518924 1277 ntBASIC19.81■□□□□ 0.76
CLSTN1O94985 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.81■□□□□ 0.76
CLSTN1O94985 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.81■□□□□ 0.76
CLSTN1O94985 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.81■□□□□ 0.76
CLSTN1O94985 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLSTN1O94985 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 AC073592.3-201ENST00000625118 1834 ntBASIC19.81■□□□□ 0.76
CLSTN1O94985 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLSTN1O94985 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.8■□□□□ 0.76
CLSTN1O94985 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
CLSTN1O94985 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
CLSTN1O94985 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 AC112907.2-201ENST00000448639 330 ntBASIC19.8■□□□□ 0.76
CLSTN1O94985 AC087388.1-201ENST00000571370 1112 ntBASIC19.8■□□□□ 0.76
CLSTN1O94985 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.8■□□□□ 0.76
CLSTN1O94985 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.8■□□□□ 0.76
CLSTN1O94985 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CLSTN1O94985 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLSTN1O94985 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLSTN1O94985 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.79■□□□□ 0.76
CLSTN1O94985 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CLSTN1O94985 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.79■□□□□ 0.76
CLSTN1O94985 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.79■□□□□ 0.76
CLSTN1O94985 FAM8A6P-201ENST00000407496 1135 ntBASIC19.79■□□□□ 0.76
CLSTN1O94985 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.79■□□□□ 0.76
CLSTN1O94985 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.79■□□□□ 0.76
CLSTN1O94985 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLSTN1O94985 AC008764.6-201ENST00000595909 2069 ntBASIC19.79■□□□□ 0.76
CLSTN1O94985 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms