Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.12■□□□□ 0.49
USP1O94782 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.12■□□□□ 0.49
USP1O94782 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.12■□□□□ 0.49
USP1O94782 AC034232.1-201ENST00000506026 1064 ntBASIC18.12■□□□□ 0.49
USP1O94782 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.12■□□□□ 0.49
USP1O94782 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
USP1O94782 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.12■□□□□ 0.49
USP1O94782 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
USP1O94782 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.12■□□□□ 0.49
USP1O94782 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
USP1O94782 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 AC084018.2-201ENST00000613093 2607 ntBASIC18.12■□□□□ 0.49
USP1O94782 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP1O94782 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.11■□□□□ 0.49
USP1O94782 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
USP1O94782 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 MIR1224-201ENST00000408193 85 ntBASIC18.11■□□□□ 0.49
USP1O94782 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.11■□□□□ 0.49
USP1O94782 SLC25A3P1-201ENST00000443844 931 ntBASIC18.11■□□□□ 0.49
USP1O94782 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.11■□□□□ 0.49
USP1O94782 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 GCSHP2-201ENST00000560971 527 ntBASIC18.11■□□□□ 0.49
USP1O94782 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.11■□□□□ 0.49
USP1O94782 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.11■□□□□ 0.49
USP1O94782 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP1O94782 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP1O94782 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.1■□□□□ 0.49
USP1O94782 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
USP1O94782 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.1■□□□□ 0.49
USP1O94782 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.1■□□□□ 0.49
USP1O94782 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.1■□□□□ 0.49
USP1O94782 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.1■□□□□ 0.49
USP1O94782 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.1■□□□□ 0.49
USP1O94782 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.1■□□□□ 0.49
USP1O94782 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.1■□□□□ 0.49
USP1O94782 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
USP1O94782 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
USP1O94782 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
USP1O94782 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
USP1O94782 OR6D1P-202ENST00000641007 5290 ntBASIC18.1■□□□□ 0.49
USP1O94782 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
USP1O94782 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 LINC00602-201ENST00000629776 2065 ntBASIC18.1■□□□□ 0.49
USP1O94782 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP1O94782 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
USP1O94782 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
USP1O94782 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
USP1O94782 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
USP1O94782 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.09■□□□□ 0.49
USP1O94782 KRT89P-201ENST00000620027 1478 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms