Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM3O75382 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 AC124067.4-201ENST00000519691 2379 ntBASIC16.7■□□□□ 0.26
TRIM3O75382 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM3O75382 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM3O75382 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 AP003733.1-201ENST00000491725 852 ntBASIC16.69■□□□□ 0.26
TRIM3O75382 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM3O75382 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM3O75382 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
TRIM3O75382 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM3O75382 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TRIM3O75382 AC012313.1-201ENST00000593393 3059 ntBASIC16.68■□□□□ 0.26
TRIM3O75382 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRIM3O75382 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM3O75382 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM3O75382 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM3O75382 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM3O75382 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.68■□□□□ 0.26
TRIM3O75382 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 KRT8P26-201ENST00000534154 1276 ntBASIC16.68■□□□□ 0.26
TRIM3O75382 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM3O75382 AC005332.3-201ENST00000589904 676 ntBASIC16.68■□□□□ 0.26
TRIM3O75382 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 AC093458.2-201ENST00000623150 629 ntBASIC16.68■□□□□ 0.26
TRIM3O75382 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM3O75382 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM3O75382 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM3O75382 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM3O75382 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM3O75382 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM3O75382 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM3O75382 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM3O75382 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM3O75382 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms