Protein–RNA interactions for Protein: O75364

PITX3, Pituitary homeobox 3, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITX3O75364 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.58□□□□□ -0.08
PITX3O75364 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.58□□□□□ -0.08
PITX3O75364 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.58□□□□□ -0.08
PITX3O75364 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.58□□□□□ -0.08
PITX3O75364 MIR4674-201ENST00000582457 87 ntBASIC14.58□□□□□ -0.08
PITX3O75364 AF186192.3-201ENST00000583427 947 ntBASIC14.58□□□□□ -0.08
PITX3O75364 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PITX3O75364 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PITX3O75364 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PITX3O75364 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.57□□□□□ -0.08
PITX3O75364 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 HLA-J-201ENST00000462773 1622 ntBASIC14.57□□□□□ -0.08
PITX3O75364 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 RNA5SP413-201ENST00000516373 109 ntBASIC14.57□□□□□ -0.08
PITX3O75364 PCDHB19P-201ENST00000570871 2371 ntBASIC14.57□□□□□ -0.08
PITX3O75364 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 AC132938.6-201ENST00000623828 1655 ntBASIC14.57□□□□□ -0.08
PITX3O75364 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PITX3O75364 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.57□□□□□ -0.08
PITX3O75364 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PITX3O75364 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.56□□□□□ -0.08
PITX3O75364 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PITX3O75364 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PITX3O75364 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
PITX3O75364 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 KRT18P23-201ENST00000435622 1283 ntBASIC14.56□□□□□ -0.08
PITX3O75364 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.56□□□□□ -0.08
PITX3O75364 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.56□□□□□ -0.08
PITX3O75364 AC009065.1-201ENST00000564055 1225 ntBASIC14.56□□□□□ -0.08
PITX3O75364 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.56□□□□□ -0.08
PITX3O75364 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.56□□□□□ -0.08
PITX3O75364 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
PITX3O75364 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PITX3O75364 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PITX3O75364 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PITX3O75364 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms