Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDH16O75309 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDH16O75309 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH16O75309 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH16O75309 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH16O75309 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH16O75309 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH16O75309 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDH16O75309 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH16O75309 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH16O75309 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH16O75309 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 AC104390.1-201ENST00000555663 520 ntBASIC18.08■□□□□ 0.48
CDH16O75309 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH16O75309 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH16O75309 LINC01451-201ENST00000623792 534 ntBASIC18.08■□□□□ 0.48
CDH16O75309 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH16O75309 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CDH16O75309 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CDH16O75309 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH16O75309 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
CDH16O75309 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH16O75309 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CDH16O75309 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDH16O75309 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH16O75309 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH16O75309 AC116562.2-201ENST00000507042 360 ntBASIC18.07■□□□□ 0.48
CDH16O75309 AC097488.1-201ENST00000507834 756 ntBASIC18.07■□□□□ 0.48
CDH16O75309 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH16O75309 WWOX-216ENST00000569818 525 ntBASIC18.07■□□□□ 0.48
CDH16O75309 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH16O75309 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH16O75309 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH16O75309 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH16O75309 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.07■□□□□ 0.48
CDH16O75309 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CDH16O75309 AL135905.2-201ENST00000584934 1404 ntBASIC18.06■□□□□ 0.48
CDH16O75309 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH16O75309 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH16O75309 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 FAM197Y1-201ENST00000421178 764 ntBASIC18.06■□□□□ 0.48
CDH16O75309 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH16O75309 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH16O75309 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH16O75309 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH16O75309 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH16O75309 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH16O75309 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms