Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 AL645608.8-201ENST00000606034 2086 ntBASIC17.19■□□□□ 0.34
PRAMEF4O60810 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 AC011498.5-201ENST00000592027 486 ntBASIC17.19■□□□□ 0.34
PRAMEF4O60810 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 TSPY22P-201ENST00000427496 604 ntBASIC17.18■□□□□ 0.34
PRAMEF4O60810 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.18■□□□□ 0.34
PRAMEF4O60810 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF4O60810 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRAMEF4O60810 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 AC133963.1-201ENST00000504166 1679 ntBASIC17.17■□□□□ 0.34
PRAMEF4O60810 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 AL121956.5-201ENST00000625261 221 ntBASIC17.17■□□□□ 0.34
PRAMEF4O60810 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 AC141586.5-201ENST00000624546 2050 ntBASIC17.17■□□□□ 0.34
PRAMEF4O60810 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF4O60810 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRAMEF4O60810 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 DDX43P3-201ENST00000441064 443 ntBASIC17.16■□□□□ 0.34
PRAMEF4O60810 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 AL353801.3-201ENST00000609898 542 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms