Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 MIR564-202ENST00000385049 94 ntBASIC13.42□□□□□ -0.26
SNAI2O43623 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.42□□□□□ -0.26
SNAI2O43623 AC239809.2-201ENST00000415381 517 ntBASIC13.42□□□□□ -0.26
SNAI2O43623 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.42□□□□□ -0.26
SNAI2O43623 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.42□□□□□ -0.26
SNAI2O43623 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SNAI2O43623 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.42□□□□□ -0.26
SNAI2O43623 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SNAI2O43623 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNAI2O43623 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.41□□□□□ -0.26
SNAI2O43623 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 FLJ16779-201ENST00000612722 7638 ntBASIC13.41□□□□□ -0.26
SNAI2O43623 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.41□□□□□ -0.26
SNAI2O43623 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SNAI2O43623 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.41□□□□□ -0.26
SNAI2O43623 KRASP1-201ENST00000407852 552 ntBASIC13.41□□□□□ -0.26
SNAI2O43623 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.41□□□□□ -0.26
SNAI2O43623 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 AC142086.2-201ENST00000569753 217 ntBASIC13.41□□□□□ -0.26
SNAI2O43623 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 AL353708.3-201ENST00000610272 989 ntBASIC13.41□□□□□ -0.26
SNAI2O43623 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SNAI2O43623 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SNAI2O43623 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.41□□□□□ -0.26
SNAI2O43623 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SNAI2O43623 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNAI2O43623 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SNAI2O43623 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SNAI2O43623 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 KRT18P55-202ENST00000578578 1546 ntBASIC13.4□□□□□ -0.26
SNAI2O43623 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.4□□□□□ -0.26
SNAI2O43623 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNAI2O43623 AC034236.2-201ENST00000606662 1610 ntBASIC13.4□□□□□ -0.26
SNAI2O43623 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms