Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.3■□□□□ 0.2
RNF13O43567 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF13O43567 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF13O43567 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RNF13O43567 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF13O43567 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF13O43567 AC010203.1-204ENST00000548782 407 ntBASIC16.3■□□□□ 0.2
RNF13O43567 GCSHP2-201ENST00000560971 527 ntBASIC16.3■□□□□ 0.2
RNF13O43567 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF13O43567 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RNF13O43567 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 AC005363.2-201ENST00000618631 242 ntBASIC16.3■□□□□ 0.2
RNF13O43567 AL023973.1-201ENST00000624619 620 ntBASIC16.3■□□□□ 0.2
RNF13O43567 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RNF13O43567 AL031432.5-201ENST00000641059 760 ntBASIC16.3■□□□□ 0.2
RNF13O43567 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF13O43567 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF13O43567 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RNF13O43567 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF13O43567 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF13O43567 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.29■□□□□ 0.2
RNF13O43567 AL137013.1-201ENST00000432946 1228 ntBASIC16.29■□□□□ 0.2
RNF13O43567 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF13O43567 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF13O43567 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF13O43567 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF13O43567 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RNF13O43567 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF13O43567 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RNF13O43567 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF13O43567 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF13O43567 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms