Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
PROM1O43490 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17■□□□□ 0.31
PROM1O43490 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17■□□□□ 0.31
PROM1O43490 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17■□□□□ 0.31
PROM1O43490 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17■□□□□ 0.31
PROM1O43490 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PROM1O43490 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PROM1O43490 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PROM1O43490 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PROM1O43490 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17■□□□□ 0.31
PROM1O43490 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PROM1O43490 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.99■□□□□ 0.31
PROM1O43490 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PROM1O43490 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PROM1O43490 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.99■□□□□ 0.31
PROM1O43490 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.99■□□□□ 0.31
PROM1O43490 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.99■□□□□ 0.31
PROM1O43490 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.99■□□□□ 0.31
PROM1O43490 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.99■□□□□ 0.31
PROM1O43490 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.99■□□□□ 0.31
PROM1O43490 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.99■□□□□ 0.31
PROM1O43490 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PROM1O43490 AC011498.5-201ENST00000592027 486 ntBASIC16.99■□□□□ 0.31
PROM1O43490 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.99■□□□□ 0.31
PROM1O43490 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PROM1O43490 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.99■□□□□ 0.31
PROM1O43490 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PROM1O43490 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.99■□□□□ 0.31
PROM1O43490 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.99■□□□□ 0.31
PROM1O43490 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PROM1O43490 AC005332.1-201ENST00000577698 1310 ntBASIC16.98■□□□□ 0.31
PROM1O43490 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 PRORSD1P-202ENST00000563365 2154 ntBASIC16.98■□□□□ 0.31
PROM1O43490 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PROM1O43490 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PROM1O43490 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.98■□□□□ 0.31
PROM1O43490 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.98■□□□□ 0.31
PROM1O43490 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.98■□□□□ 0.31
PROM1O43490 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.98■□□□□ 0.31
PROM1O43490 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.98■□□□□ 0.31
PROM1O43490 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PROM1O43490 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PROM1O43490 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PROM1O43490 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PROM1O43490 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.97■□□□□ 0.31
PROM1O43490 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.97■□□□□ 0.31
PROM1O43490 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PROM1O43490 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PROM1O43490 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PROM1O43490 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PROM1O43490 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms