Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A1O14983 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2A1O14983 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A1O14983 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP2A1O14983 AC098831.1-202ENST00000438821 336 ntBASIC20.4■□□□□ 0.86
ATP2A1O14983 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ATP2A1O14983 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A1O14983 PMS2P7-201ENST00000506558 1336 ntBASIC20.4■□□□□ 0.86
ATP2A1O14983 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP2A1O14983 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP2A1O14983 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2A1O14983 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP2A1O14983 AC105339.3-201ENST00000560043 636 ntBASIC20.4■□□□□ 0.86
ATP2A1O14983 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2A1O14983 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP2A1O14983 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A1O14983 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2A1O14983 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A1O14983 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A1O14983 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP2A1O14983 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A1O14983 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
ATP2A1O14983 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
ATP2A1O14983 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A1O14983 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A1O14983 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A1O14983 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
ATP2A1O14983 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A1O14983 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A1O14983 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.39■□□□□ 0.86
ATP2A1O14983 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATP2A1O14983 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATP2A1O14983 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A1O14983 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP2A1O14983 SPDYE21P-201ENST00000413323 827 ntBASIC20.39■□□□□ 0.85
ATP2A1O14983 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP2A1O14983 POLD2P1-201ENST00000511220 997 ntBASIC20.39■□□□□ 0.85
ATP2A1O14983 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A1O14983 AC034105.1-201ENST00000563488 319 ntBASIC20.39■□□□□ 0.85
ATP2A1O14983 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A1O14983 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A1O14983 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A1O14983 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ATP2A1O14983 AC104109.2-201ENST00000602919 1418 ntBASIC20.38■□□□□ 0.85
ATP2A1O14983 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A1O14983 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A1O14983 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP2A1O14983 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP2A1O14983 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 AC092910.1-201ENST00000482027 1129 ntBASIC20.38■□□□□ 0.85
ATP2A1O14983 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.38■□□□□ 0.85
ATP2A1O14983 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP2A1O14983 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A1O14983 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A1O14983 AL096828.2-201ENST00000567259 1965 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 AL353593.2-201ENST00000602529 1483 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 AC093677.2-201ENST00000600169 1863 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 BCL2-203ENST00000589955 5011 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 KRT18P13-201ENST00000400056 1290 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 PGAM5P1-201ENST00000518923 814 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms