Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 AC011270.2-201ENST00000624293 2550 ntBASIC16.76■□□□□ 0.27
AP3D1O14617 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
AP3D1O14617 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
AP3D1O14617 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3D1O14617 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.76■□□□□ 0.27
AP3D1O14617 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 MIR3180-4-201ENST00000582223 153 ntBASIC16.76■□□□□ 0.27
AP3D1O14617 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 AC133561.5-201ENST00000635547 218 ntBASIC16.76■□□□□ 0.27
AP3D1O14617 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3D1O14617 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3D1O14617 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3D1O14617 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 AC093010.1-201ENST00000473625 1624 ntBASIC16.75■□□□□ 0.27
AP3D1O14617 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3D1O14617 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
AP3D1O14617 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3D1O14617 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
AP3D1O14617 SLC25A3P1-201ENST00000443844 931 ntBASIC16.75■□□□□ 0.27
AP3D1O14617 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.75■□□□□ 0.27
AP3D1O14617 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.75■□□□□ 0.27
AP3D1O14617 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.75■□□□□ 0.27
AP3D1O14617 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.75■□□□□ 0.27
AP3D1O14617 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
AP3D1O14617 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
AP3D1O14617 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP3D1O14617 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.75■□□□□ 0.27
AP3D1O14617 AC080080.1-201ENST00000625121 2420 ntBASIC16.75■□□□□ 0.27
AP3D1O14617 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP3D1O14617 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP3D1O14617 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
AP3D1O14617 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.74■□□□□ 0.27
AP3D1O14617 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 AC010203.1-204ENST00000548782 407 ntBASIC16.74■□□□□ 0.27
AP3D1O14617 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 AL512604.3-201ENST00000569583 964 ntBASIC16.74■□□□□ 0.27
AP3D1O14617 AC073912.3-201ENST00000624414 853 ntBASIC16.74■□□□□ 0.27
AP3D1O14617 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms