Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 KRT126P-201ENST00000549467 1181 ntBASIC17.46■□□□□ 0.39
E2F3O00716 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
E2F3O00716 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.46■□□□□ 0.39
E2F3O00716 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
E2F3O00716 AC140113.3-201ENST00000605663 199 ntBASIC17.46■□□□□ 0.39
E2F3O00716 AL031432.5-201ENST00000641059 760 ntBASIC17.46■□□□□ 0.39
E2F3O00716 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
E2F3O00716 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
E2F3O00716 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
E2F3O00716 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
E2F3O00716 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
E2F3O00716 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
E2F3O00716 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.46■□□□□ 0.39
E2F3O00716 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.46■□□□□ 0.39
E2F3O00716 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
E2F3O00716 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.46■□□□□ 0.39
E2F3O00716 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
E2F3O00716 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
E2F3O00716 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.45■□□□□ 0.38
E2F3O00716 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
E2F3O00716 FZD10-202ENST00000539839 3282 ntBASIC17.45■□□□□ 0.38
E2F3O00716 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.45■□□□□ 0.38
E2F3O00716 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.45■□□□□ 0.38
E2F3O00716 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 PCED1CP-201ENST00000419887 785 ntBASIC17.45■□□□□ 0.38
E2F3O00716 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.45■□□□□ 0.38
E2F3O00716 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.45■□□□□ 0.38
E2F3O00716 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.45■□□□□ 0.38
E2F3O00716 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.45■□□□□ 0.38
E2F3O00716 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.45■□□□□ 0.38
E2F3O00716 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.45■□□□□ 0.38
E2F3O00716 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.45■□□□□ 0.38
E2F3O00716 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 AL136038.4-201ENST00000603606 1261 ntBASIC17.45■□□□□ 0.38
E2F3O00716 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.45■□□□□ 0.38
E2F3O00716 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
E2F3O00716 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
E2F3O00716 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
E2F3O00716 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
E2F3O00716 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
E2F3O00716 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
E2F3O00716 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
E2F3O00716 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.44■□□□□ 0.38
E2F3O00716 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
E2F3O00716 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 SPDYE15P-201ENST00000424157 909 ntBASIC17.44■□□□□ 0.38
E2F3O00716 HOMER2P1-201ENST00000455653 964 ntBASIC17.44■□□□□ 0.38
E2F3O00716 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.44■□□□□ 0.38
E2F3O00716 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.44■□□□□ 0.38
E2F3O00716 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.44■□□□□ 0.38
E2F3O00716 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.44■□□□□ 0.38
E2F3O00716 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.44■□□□□ 0.38
E2F3O00716 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.44■□□□□ 0.38
E2F3O00716 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.44■□□□□ 0.38
E2F3O00716 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
E2F3O00716 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 AC141586.5-201ENST00000624546 2050 ntBASIC17.44■□□□□ 0.38
E2F3O00716 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
E2F3O00716 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
E2F3O00716 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.43■□□□□ 0.38
E2F3O00716 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
E2F3O00716 IER3-202ENST00000376377 1350 ntBASIC17.43■□□□□ 0.38
E2F3O00716 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E2F3O00716 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
E2F3O00716 AC133963.1-201ENST00000504166 1679 ntBASIC17.43■□□□□ 0.38
E2F3O00716 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.43■□□□□ 0.38
E2F3O00716 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
E2F3O00716 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E2F3O00716 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.43■□□□□ 0.38
E2F3O00716 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
E2F3O00716 KRT18P48-201ENST00000434763 852 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms