Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 AD000864.1-201ENST00000624076 2295 ntBASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 AC005332.1-201ENST00000577698 1310 ntBASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPDYE4A6NLX3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 RPS20P25-201ENST00000412447 352 ntBASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 AL392088.1-201ENST00000428364 670 ntBASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SPDYE4A6NLX3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 AC112907.2-201ENST00000448639 330 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 AC026616.1-201ENST00000523157 525 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 AC008622.2-201ENST00000617006 1229 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 AL162727.3-201ENST00000635661 2787 ntBASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms