Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 AC104109.2-201ENST00000602919 1418 ntBASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TBC1D3BA6NDS4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC122714.2-201ENST00000502787 707 ntBASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 DUTP2-201ENST00000519164 463 ntBASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC092865.5-201ENST00000545435 363 ntBASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC012640.2-201ENST00000561606 901 ntBASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 AC008735.5-201ENST00000623544 497 ntBASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 BX323043.1-201ENST00000641006 1765 ntBASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TBC1D3BA6NDS4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 AP000974.1-201ENST00000623909 2387 ntBASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 KRT8P47-201ENST00000604727 1398 ntBASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 BX005266.1-201ENST00000473402 457 ntBASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 IGHV3-22-201ENST00000520721 359 ntBASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.1■□□□□ 0.49
TBC1D3BA6NDS4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 AC098831.1-202ENST00000438821 336 ntBASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 AC105339.3-201ENST00000560043 636 ntBASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 AC107918.4-202ENST00000641623 219 ntBASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TBC1D3BA6NDS4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms