Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.69■□□□□ 0.9
SSC5DA1L4H1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSC5DA1L4H1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 AP002414.1-201ENST00000391405 1147 ntBASIC20.68■□□□□ 0.9
SSC5DA1L4H1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.68■□□□□ 0.9
SSC5DA1L4H1 AC109462.3-201ENST00000573934 613 ntBASIC20.68■□□□□ 0.9
SSC5DA1L4H1 AC092364.2-202ENST00000597012 1073 ntBASIC20.68■□□□□ 0.9
SSC5DA1L4H1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 AC100803.2-201ENST00000562459 1963 ntBASIC20.67■□□□□ 0.9
SSC5DA1L4H1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSC5DA1L4H1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 AC025580.3-201ENST00000617932 1424 ntBASIC20.66■□□□□ 0.9
SSC5DA1L4H1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSC5DA1L4H1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 AC093512.1-201ENST00000617969 520 ntBASIC20.65■□□□□ 0.9
SSC5DA1L4H1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 AC009336.1-201ENST00000608941 1553 ntBASIC20.65■□□□□ 0.9
SSC5DA1L4H1 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSC5DA1L4H1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
SSC5DA1L4H1 AC004461.1-201ENST00000412461 403 ntBASIC20.64■□□□□ 0.9
SSC5DA1L4H1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms