Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 MIR7706-201ENST00000613747 67 ntBASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSNK1G3Q9Y6M4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AL356309.3-201ENST00000624132 1934 ntBASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 FAM220CP-201ENST00000395253 831 ntBASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 HNRNPDP1-201ENST00000439535 754 ntBASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 SLC25A1P1-201ENST00000528351 927 ntBASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AC021087.4-201ENST00000563761 564 ntBASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AL139288.1-201ENST00000623748 933 ntBASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSNK1G3Q9Y6M4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 RPL13AP23-201ENST00000480739 586 ntBASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 AC020916.1-201ENST00000587762 1774 ntBASIC17.48■□□□□ 0.39
CSNK1G3Q9Y6M4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 AC104581.1-202ENST00000635932 2618 ntBASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSNK1G3Q9Y6M4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms