Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 C20orf181-201ENST00000623918 480 ntBASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 AL353593.2-201ENST00000602529 1483 ntBASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HCFC2Q9Y5Z7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 VN2R19P-201ENST00000442399 1052 ntBASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AL513190.1-201ENST00000621254 727 ntBASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AC148477.5-201ENST00000625164 1645 ntBASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 AC132938.5-201ENST00000624980 1813 ntBASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HCFC2Q9Y5Z7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 AC126763.1-201ENST00000552015 2118 ntBASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 HTR5BP-201ENST00000430851 1154 ntBASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 HCG4B-203ENST00000450128 991 ntBASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 IGHV3-65-201ENST00000523210 341 ntBASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HCFC2Q9Y5Z7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 AL049757.1-201ENST00000616842 1596 ntBASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 NCF1C-201ENST00000438382 1427 ntBASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 RPS15P9-201ENST00000494093 319 ntBASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC2Q9Y5Z7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
HCFC2Q9Y5Z7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC2Q9Y5Z7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms