Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM197Y8-203ENST00000450145 560 ntBASIC16.41■□□□□ 0.22
LRFN1Q9P244 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 AC098818.2-201ENST00000564925 2320 ntBASIC16.41■□□□□ 0.22
LRFN1Q9P244 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 AC093010.1-201ENST00000473625 1624 ntBASIC16.41■□□□□ 0.22
LRFN1Q9P244 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 AC022898.2-201ENST00000616822 1312 ntBASIC16.4■□□□□ 0.22
LRFN1Q9P244 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRFN1Q9P244 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.4■□□□□ 0.22
LRFN1Q9P244 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRFN1Q9P244 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 RBM17P3-201ENST00000417687 1192 ntBASIC16.39■□□□□ 0.21
LRFN1Q9P244 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 MTDHP3-201ENST00000594186 672 ntBASIC16.39■□□□□ 0.21
LRFN1Q9P244 TP73-AS1-207ENST00000624167 988 ntBASIC16.39■□□□□ 0.21
LRFN1Q9P244 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
LRFN1Q9P244 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRFN1Q9P244 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms