Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 C2orf69P3-201ENST00000565542 1120 ntBASIC16.94■□□□□ 0.3
VAPAQ9P0L0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPAQ9P0L0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 AC009949.1-201ENST00000623048 1830 ntBASIC16.93■□□□□ 0.3
VAPAQ9P0L0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 TSPY14P-201ENST00000303979 915 ntBASIC16.93■□□□□ 0.3
VAPAQ9P0L0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 AC009947.2-201ENST00000444014 672 ntBASIC16.93■□□□□ 0.3
VAPAQ9P0L0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 MIR4785-201ENST00000585005 73 ntBASIC16.93■□□□□ 0.3
VAPAQ9P0L0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPAQ9P0L0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VAPAQ9P0L0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VAPAQ9P0L0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms