Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 AC005104.2-201ENST00000427818 678 ntBASIC17.67■□□□□ 0.42
MKS1Q9NXB0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 FITM1-202ENST00000559294 800 ntBASIC17.67■□□□□ 0.42
MKS1Q9NXB0 AP003071.4-201ENST00000562276 1284 ntBASIC17.67■□□□□ 0.42
MKS1Q9NXB0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MKS1Q9NXB0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 KRT18P65-201ENST00000439811 1286 ntBASIC17.66■□□□□ 0.42
MKS1Q9NXB0 UBE2SP1-201ENST00000450587 669 ntBASIC17.66■□□□□ 0.42
MKS1Q9NXB0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MKS1Q9NXB0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.65■□□□□ 0.42
MKS1Q9NXB0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MKS1Q9NXB0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.42
MKS1Q9NXB0 AC116353.5-201ENST00000638148 1699 ntBASIC17.64■□□□□ 0.42
MKS1Q9NXB0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MKS1Q9NXB0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms