Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 ATP5G2P1-201ENST00000433580 426 ntBASIC19.09■□□□□ 0.65
CISHQ9NSE2 DRAXINP1-201ENST00000437611 948 ntBASIC19.09■□□□□ 0.65
CISHQ9NSE2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC091607.1-201ENST00000490318 1060 ntBASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.09■□□□□ 0.65
CISHQ9NSE2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CISHQ9NSE2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.09■□□□□ 0.65
CISHQ9NSE2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CISHQ9NSE2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CISHQ9NSE2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CISHQ9NSE2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.08■□□□□ 0.65
CISHQ9NSE2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CISHQ9NSE2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CISHQ9NSE2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 AC246785.2-201ENST00000432512 513 ntBASIC19.08■□□□□ 0.64
CISHQ9NSE2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 AC092119.3-201ENST00000612618 583 ntBASIC19.08■□□□□ 0.64
CISHQ9NSE2 AC116407.2-201ENST00000613639 860 ntBASIC19.08■□□□□ 0.64
CISHQ9NSE2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 AC134043.2-201ENST00000624206 2238 ntBASIC19.08■□□□□ 0.64
CISHQ9NSE2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.08■□□□□ 0.64
CISHQ9NSE2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CISHQ9NSE2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 TOB2P1-201ENST00000469761 992 ntBASIC19.07■□□□□ 0.64
CISHQ9NSE2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 AP005901.3-202ENST00000581653 237 ntBASIC19.07■□□□□ 0.64
CISHQ9NSE2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 AC005336.2-201ENST00000593183 939 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms