Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AC112698.1-201ENST00000510299 916 ntBASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 GUSBP12-201ENST00000513727 720 ntBASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 GNAS-203ENST00000306120 1878 ntBASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 AC100803.2-201ENST00000562459 1963 ntBASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 AC068472.1-201ENST00000474589 881 ntBASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 KRT8P26-201ENST00000534154 1276 ntBASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
UBQLN4Q9NRR5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 MTCL1P1-201ENST00000446207 792 ntBASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 AC090616.6-201ENST00000582640 721 ntBASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBQLN4Q9NRR5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 AC134043.2-201ENST00000624206 2238 ntBASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms