Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSU72Q9NP77 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.77■□□□□ 0.44
SSU72Q9NP77 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSU72Q9NP77 RPPH1-201ENST00000516869 333 ntBASIC17.77■□□□□ 0.44
SSU72Q9NP77 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.77■□□□□ 0.44
SSU72Q9NP77 AL353719.1-201ENST00000566847 864 ntBASIC17.77■□□□□ 0.44
SSU72Q9NP77 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SSU72Q9NP77 AC006058.3-201ENST00000606217 1069 ntBASIC17.77■□□□□ 0.44
SSU72Q9NP77 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSU72Q9NP77 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SSU72Q9NP77 AL135905.2-201ENST00000584934 1404 ntBASIC17.77■□□□□ 0.44
SSU72Q9NP77 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SSU72Q9NP77 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSU72Q9NP77 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSU72Q9NP77 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSU72Q9NP77 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SSU72Q9NP77 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSU72Q9NP77 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
SSU72Q9NP77 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SSU72Q9NP77 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SSU72Q9NP77 PCDHB19P-201ENST00000570871 2371 ntBASIC17.76■□□□□ 0.43
SSU72Q9NP77 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 SLC25A1P2-201ENST00000430693 912 ntBASIC17.76■□□□□ 0.43
SSU72Q9NP77 TSPY17P-201ENST00000450329 467 ntBASIC17.76■□□□□ 0.43
SSU72Q9NP77 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 AP005242.2-201ENST00000580065 1175 ntBASIC17.76■□□□□ 0.43
SSU72Q9NP77 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.76■□□□□ 0.43
SSU72Q9NP77 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SSU72Q9NP77 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 AC018695.7-201ENST00000624587 2492 ntBASIC17.75■□□□□ 0.43
SSU72Q9NP77 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 KRT18P29-201ENST00000397031 1267 ntBASIC17.75■□□□□ 0.43
SSU72Q9NP77 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 CRYGFP-201ENST00000418459 633 ntBASIC17.75■□□□□ 0.43
SSU72Q9NP77 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.75■□□□□ 0.43
SSU72Q9NP77 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
SSU72Q9NP77 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SSU72Q9NP77 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 AC116353.5-201ENST00000638148 1699 ntBASIC17.74■□□□□ 0.43
SSU72Q9NP77 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 AC060834.1-201ENST00000443027 2032 ntBASIC17.74■□□□□ 0.43
SSU72Q9NP77 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms