Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 AC016734.2-201ENST00000624325 1377 ntBASIC15.31■□□□□ 0.04
GCM1Q9NP62 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GCM1Q9NP62 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 TSSC2-201ENST00000450217 709 ntBASIC15.3■□□□□ 0.04
GCM1Q9NP62 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 AL096828.2-201ENST00000567259 1965 ntBASIC15.3■□□□□ 0.04
GCM1Q9NP62 AC007613.1-201ENST00000572811 2597 ntBASIC15.3■□□□□ 0.04
GCM1Q9NP62 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GCM1Q9NP62 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
GCM1Q9NP62 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 LINC00167-201ENST00000530583 1419 ntBASIC15.29■□□□□ 0.04
GCM1Q9NP62 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 CHCHD2P8-201ENST00000429873 447 ntBASIC15.29■□□□□ 0.04
GCM1Q9NP62 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.29■□□□□ 0.04
GCM1Q9NP62 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms