Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 IGHGP-201ENST00000390555 1178 ntBASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 RN7SL606P-201ENST00000472779 293 ntBASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE5Q9HCH3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 AC009053.2-201ENST00000563701 2365 ntBASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 AL355385.1-201ENST00000606123 409 ntBASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE5Q9HCH3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 ZNF259P1-201ENST00000407656 1365 ntBASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 MIR564-202ENST00000385049 94 ntBASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 AC139887.3-201ENST00000568585 713 ntBASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 AL591684.3-201ENST00000605187 298 ntBASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 MIR7706-201ENST00000613747 67 ntBASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 AC055717.3-201ENST00000622967 595 ntBASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE5Q9HCH3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 AC008556.1-201ENST00000610908 2040 ntBASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE5Q9HCH3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms