Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AC141586.5-201ENST00000624546 2050 ntBASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AC073912.3-201ENST00000624414 853 ntBASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LRTM1Q9HBL6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 AC034232.1-201ENST00000506026 1064 ntBASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 GCSHP2-201ENST00000560971 527 ntBASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRTM1Q9HBL6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 AC113404.2-201ENST00000507884 177 ntBASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 AC133963.1-201ENST00000504166 1679 ntBASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 AC108860.2-201ENST00000562760 2183 ntBASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRTM1Q9HBL6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms