Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 AC108073.2-201ENST00000464002 357 ntBASIC19.49■□□□□ 0.71
HIPK3Q9H422 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.49■□□□□ 0.71
HIPK3Q9H422 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIPK3Q9H422 AC006504.4-201ENST00000592118 1568 ntBASIC19.49■□□□□ 0.71
HIPK3Q9H422 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 KRT8P47-201ENST00000604727 1398 ntBASIC19.48■□□□□ 0.71
HIPK3Q9H422 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 AL645939.2-201ENST00000427340 991 ntBASIC19.48■□□□□ 0.71
HIPK3Q9H422 AC103564.2-201ENST00000432853 1299 ntBASIC19.48■□□□□ 0.71
HIPK3Q9H422 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 VN2R19P-201ENST00000442399 1052 ntBASIC19.48■□□□□ 0.71
HIPK3Q9H422 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 AL078644.1-201ENST00000609881 752 ntBASIC19.48■□□□□ 0.71
HIPK3Q9H422 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.48■□□□□ 0.71
HIPK3Q9H422 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIPK3Q9H422 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 AL020989.1-201ENST00000422979 469 ntBASIC19.47■□□□□ 0.71
HIPK3Q9H422 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 AP002472.1-201ENST00000577490 586 ntBASIC19.47■□□□□ 0.71
HIPK3Q9H422 AL513190.1-201ENST00000621254 727 ntBASIC19.47■□□□□ 0.71
HIPK3Q9H422 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.47■□□□□ 0.71
HIPK3Q9H422 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIPK3Q9H422 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 MKNK2P1-201ENST00000437526 628 ntBASIC19.46■□□□□ 0.71
HIPK3Q9H422 HCG4B-203ENST00000450128 991 ntBASIC19.46■□□□□ 0.71
HIPK3Q9H422 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIPK3Q9H422 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HIPK3Q9H422 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIPK3Q9H422 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
HIPK3Q9H422 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HIPK3Q9H422 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
HIPK3Q9H422 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms