Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM4Q9C037 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AC008764.6-201ENST00000595909 2069 ntBASIC17.92■□□□□ 0.46
TRIM4Q9C037 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AC080080.1-201ENST00000625121 2420 ntBASIC17.92■□□□□ 0.46
TRIM4Q9C037 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AL671277.2-201ENST00000458060 996 ntBASIC17.92■□□□□ 0.46
TRIM4Q9C037 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 SLC25A1P4-201ENST00000567977 778 ntBASIC17.92■□□□□ 0.46
TRIM4Q9C037 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AC023511.2-201ENST00000618803 211 ntBASIC17.92■□□□□ 0.46
TRIM4Q9C037 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM4Q9C037 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM4Q9C037 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 TSPY21P-201ENST00000433481 731 ntBASIC17.91■□□□□ 0.46
TRIM4Q9C037 AC011506.1-201ENST00000474329 610 ntBASIC17.91■□□□□ 0.46
TRIM4Q9C037 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 DGCR10-201ENST00000609839 495 ntBASIC17.91■□□□□ 0.46
TRIM4Q9C037 AC011558.1-201ENST00000623459 338 ntBASIC17.91■□□□□ 0.46
TRIM4Q9C037 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM4Q9C037 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM4Q9C037 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 AC126763.1-201ENST00000552015 2118 ntBASIC17.9■□□□□ 0.46
TRIM4Q9C037 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 Z98044.1-201ENST00000632503 1764 ntBASIC17.9■□□□□ 0.46
TRIM4Q9C037 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM4Q9C037 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM4Q9C037 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms