Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 RN7SKP217-201ENST00000364640 340 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 OPN5-203ENST00000393699 1142 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AL139274.1-201ENST00000402374 936 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 RN7SKP65-201ENST00000410278 313 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AK4P4-201ENST00000419465 646 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 UBE2D3P3-201ENST00000426992 425 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 NPM1P22-201ENST00000427761 952 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 BX119917.1-201ENST00000432517 502 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AL590302.2-201ENST00000435810 1122 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 RPS2P7-201ENST00000447334 885 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 LRRC37A14P-201ENST00000452297 462 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 MTND3P7-201ENST00000474435 343 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC074344.1-201ENST00000512823 224 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 UBTFL9-201ENST00000534504 1148 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 PDCD5P1-201ENST00000543528 309 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC090286.3-201ENST00000573133 187 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC106900.2-201ENST00000604994 317 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AL022068.1-205ENST00000638138 904 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AC119674.1-201ENST00000641611 1210 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AL354685.1-201ENST00000427866 1755 ntBASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 CNRIP1-203ENST00000409862 1748 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-3Q9BYR6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AC009303.4-201ENST00000623784 1500 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 CLRN1-201ENST00000295911 1444 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AL161729.1-201ENST00000604104 1402 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AL137845.1-201ENST00000340681 1110 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AL096700.1-201ENST00000358001 744 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 CALCA-202ENST00000361010 916 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 COX20-201ENST00000366528 568 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 RPS6-202ENST00000380381 892 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AL590623.1-201ENST00000427864 105 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 RPL5P4-201ENST00000434805 886 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 RPS24P1-201ENST00000438550 371 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 NIPA2P5-201ENST00000452282 464 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AL358876.1-201ENST00000453364 1075 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 USP9YP34-201ENST00000453983 808 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AC126182.1-201ENST00000478134 357 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 HES4-204ENST00000484667 667 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 MTCO1P30-201ENST00000515244 580 ntBASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 CASP5-209ENST00000531367 879 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AC078962.3-201ENST00000545821 482 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP3-3Q9BYR6 OR4G1P-201ENST00000588632 938 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms