Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC122714.2-201ENST00000502787 707 ntBASIC18.63■□□□□ 0.57
LRRC3Q9BY71 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 AC145285.3-201ENST00000564603 959 ntBASIC18.63■□□□□ 0.57
LRRC3Q9BY71 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 AD001527.2-201ENST00000622994 785 ntBASIC18.63■□□□□ 0.57
LRRC3Q9BY71 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 NEFHP1-201ENST00000412845 2629 ntBASIC18.63■□□□□ 0.57
LRRC3Q9BY71 PMPCAP1-201ENST00000508114 1576 ntBASIC18.63■□□□□ 0.57
LRRC3Q9BY71 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 POLD2P1-201ENST00000511220 997 ntBASIC18.62■□□□□ 0.57
LRRC3Q9BY71 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 OR7E14P-202ENST00000530490 1290 ntBASIC18.62■□□□□ 0.57
LRRC3Q9BY71 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 MTDHP4-201ENST00000600287 670 ntBASIC18.62■□□□□ 0.57
LRRC3Q9BY71 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC3Q9BY71 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC3Q9BY71 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 AC079776.2-201ENST00000641154 1609 ntBASIC18.6■□□□□ 0.57
LRRC3Q9BY71 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 AC008735.5-201ENST00000623544 497 ntBASIC18.6■□□□□ 0.57
LRRC3Q9BY71 AC073592.4-201ENST00000623827 446 ntBASIC18.6■□□□□ 0.57
LRRC3Q9BY71 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC3Q9BY71 AC107918.4-202ENST00000641623 219 ntBASIC18.6■□□□□ 0.57
LRRC3Q9BY71 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms