Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 FGFR3P6-201ENST00000457012 610 ntBASIC20.79■□□□□ 0.92
SLF1Q9BQI6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLF1Q9BQI6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 MTDHP3-201ENST00000594186 672 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AC120114.3-201ENST00000611923 658 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 BX640515.1-201ENST00000617215 977 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AC148477.8-201ENST00000624298 468 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AL390961.4-201ENST00000623958 2535 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AC135050.7-201ENST00000624508 2218 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AC090164.3-201ENST00000610780 2143 ntBASIC20.78■□□□□ 0.92
SLF1Q9BQI6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.78■□□□□ 0.92
SLF1Q9BQI6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 AL031284.1-201ENST00000419297 478 ntBASIC20.77■□□□□ 0.92
SLF1Q9BQI6 AL590627.1-203ENST00000421194 1026 ntBASIC20.77■□□□□ 0.92
SLF1Q9BQI6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLF1Q9BQI6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLF1Q9BQI6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLF1Q9BQI6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.76■□□□□ 0.91
SLF1Q9BQI6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLF1Q9BQI6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLF1Q9BQI6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SLF1Q9BQI6 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.75■□□□□ 0.91
SLF1Q9BQI6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms