Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.84■□□□□ 0.13
VRK1Q99986 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.84■□□□□ 0.13
VRK1Q99986 KRT18P56-201ENST00000507275 550 ntBASIC15.84■□□□□ 0.13
VRK1Q99986 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK1Q99986 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
VRK1Q99986 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK1Q99986 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VRK1Q99986 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.84■□□□□ 0.13
VRK1Q99986 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VRK1Q99986 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
VRK1Q99986 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK1Q99986 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 AL356309.3-201ENST00000624132 1934 ntBASIC15.84■□□□□ 0.13
VRK1Q99986 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK1Q99986 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VRK1Q99986 KRT8P32-201ENST00000512863 1461 ntBASIC15.84■□□□□ 0.13
VRK1Q99986 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.84■□□□□ 0.13
VRK1Q99986 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.83■□□□□ 0.13
VRK1Q99986 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.83■□□□□ 0.13
VRK1Q99986 AL162741.1-201ENST00000565563 1558 ntBASIC15.83■□□□□ 0.13
VRK1Q99986 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VRK1Q99986 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.83■□□□□ 0.13
VRK1Q99986 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VRK1Q99986 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.83■□□□□ 0.12
VRK1Q99986 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.83■□□□□ 0.12
VRK1Q99986 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 AL645929.1-201ENST00000420084 975 ntBASIC15.83■□□□□ 0.12
VRK1Q99986 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VRK1Q99986 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.83■□□□□ 0.12
VRK1Q99986 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.83■□□□□ 0.12
VRK1Q99986 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.83■□□□□ 0.12
VRK1Q99986 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 AC124067.4-201ENST00000519691 2379 ntBASIC15.83■□□□□ 0.12
VRK1Q99986 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VRK1Q99986 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
VRK1Q99986 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 MIR564-202ENST00000385049 94 ntBASIC15.82■□□□□ 0.12
VRK1Q99986 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.82■□□□□ 0.12
VRK1Q99986 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.82■□□□□ 0.12
VRK1Q99986 MIR3917-201ENST00000580971 93 ntBASIC15.82■□□□□ 0.12
VRK1Q99986 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.82■□□□□ 0.12
VRK1Q99986 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
VRK1Q99986 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
VRK1Q99986 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.82■□□□□ 0.12
VRK1Q99986 KRT8P7-201ENST00000533003 1432 ntBASIC15.82■□□□□ 0.12
VRK1Q99986 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VRK1Q99986 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.82■□□□□ 0.12
VRK1Q99986 SIRPAP1-201ENST00000448467 1770 ntBASIC15.82■□□□□ 0.12
VRK1Q99986 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VRK1Q99986 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms