Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.4■□□□□ 0.86
ARID3AQ99856 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.4■□□□□ 0.86
ARID3AQ99856 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.4■□□□□ 0.86
ARID3AQ99856 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.4■□□□□ 0.86
ARID3AQ99856 AL355075.4-201ENST00000554988 638 ntBASIC20.4■□□□□ 0.86
ARID3AQ99856 MIR4785-201ENST00000585005 73 ntBASIC20.4■□□□□ 0.86
ARID3AQ99856 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ARID3AQ99856 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ARID3AQ99856 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ARID3AQ99856 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ARID3AQ99856 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ARID3AQ99856 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ARID3AQ99856 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ARID3AQ99856 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.39■□□□□ 0.86
ARID3AQ99856 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ARID3AQ99856 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.39■□□□□ 0.86
ARID3AQ99856 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ARID3AQ99856 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.39■□□□□ 0.85
ARID3AQ99856 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARID3AQ99856 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.39■□□□□ 0.85
ARID3AQ99856 RBM17P1-201ENST00000453646 1190 ntBASIC20.39■□□□□ 0.85
ARID3AQ99856 CKBP1-201ENST00000565489 1086 ntBASIC20.39■□□□□ 0.85
ARID3AQ99856 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.39■□□□□ 0.85
ARID3AQ99856 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.39■□□□□ 0.85
ARID3AQ99856 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARID3AQ99856 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.39■□□□□ 0.85
ARID3AQ99856 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ARID3AQ99856 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ARID3AQ99856 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARID3AQ99856 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ARID3AQ99856 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ARID3AQ99856 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ARID3AQ99856 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.38■□□□□ 0.85
ARID3AQ99856 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.38■□□□□ 0.85
ARID3AQ99856 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.38■□□□□ 0.85
ARID3AQ99856 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 PRSS44-201ENST00000515154 1146 ntBASIC20.38■□□□□ 0.85
ARID3AQ99856 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.38■□□□□ 0.85
ARID3AQ99856 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ARID3AQ99856 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ARID3AQ99856 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ARID3AQ99856 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ARID3AQ99856 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ARID3AQ99856 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ARID3AQ99856 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ARID3AQ99856 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
ARID3AQ99856 SLC25A1P4-201ENST00000567977 778 ntBASIC20.37■□□□□ 0.85
ARID3AQ99856 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ARID3AQ99856 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms