Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 TSPY12P-201ENST00000421279 868 ntBASIC16.32■□□□□ 0.2
NPAS1Q99742 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 TSSC2-201ENST00000450217 709 ntBASIC16.32■□□□□ 0.2
NPAS1Q99742 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 AC091607.1-201ENST00000490318 1060 ntBASIC16.32■□□□□ 0.2
NPAS1Q99742 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS1Q99742 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS1Q99742 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS1Q99742 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS1Q99742 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS1Q99742 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 AL121672.3-201ENST00000608644 468 ntBASIC16.32■□□□□ 0.2
NPAS1Q99742 NPAP1P7-201ENST00000613027 823 ntBASIC16.32■□□□□ 0.2
NPAS1Q99742 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS1Q99742 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NPAS1Q99742 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NPAS1Q99742 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS1Q99742 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS1Q99742 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS1Q99742 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NPAS1Q99742 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NPAS1Q99742 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS1Q99742 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS1Q99742 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 AC068472.1-201ENST00000474589 881 ntBASIC16.31■□□□□ 0.2
NPAS1Q99742 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.31■□□□□ 0.2
NPAS1Q99742 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 MIR3180-1-201ENST00000580374 94 ntBASIC16.31■□□□□ 0.2
NPAS1Q99742 MIR3180-3-201ENST00000584616 94 ntBASIC16.31■□□□□ 0.2
NPAS1Q99742 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 AC008687.5-201ENST00000593746 558 ntBASIC16.31■□□□□ 0.2
NPAS1Q99742 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 AL592071.1-201ENST00000611956 408 ntBASIC16.31■□□□□ 0.2
NPAS1Q99742 AC124864.1-201ENST00000623408 392 ntBASIC16.31■□□□□ 0.2
NPAS1Q99742 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS1Q99742 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
NPAS1Q99742 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS1Q99742 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS1Q99742 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS1Q99742 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NPAS1Q99742 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 PRORSD1P-202ENST00000563365 2154 ntBASIC16.3■□□□□ 0.2
NPAS1Q99742 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPAS1Q99742 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS1Q99742 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS1Q99742 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.3■□□□□ 0.2
NPAS1Q99742 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS1Q99742 AC069148.1-201ENST00000608741 768 ntBASIC16.3■□□□□ 0.2
NPAS1Q99742 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.3■□□□□ 0.2
NPAS1Q99742 AC092119.3-201ENST00000612618 583 ntBASIC16.3■□□□□ 0.2
NPAS1Q99742 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.3■□□□□ 0.2
NPAS1Q99742 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms