Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.17■□□□□ 0.34
BARD1Q99728 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BARD1Q99728 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BARD1Q99728 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BARD1Q99728 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.17■□□□□ 0.34
BARD1Q99728 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
BARD1Q99728 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BARD1Q99728 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.16■□□□□ 0.34
BARD1Q99728 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
BARD1Q99728 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
BARD1Q99728 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.16■□□□□ 0.34
BARD1Q99728 FDX1P1-201ENST00000449115 551 ntBASIC17.16■□□□□ 0.34
BARD1Q99728 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.16■□□□□ 0.34
BARD1Q99728 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.16■□□□□ 0.34
BARD1Q99728 MIR3652-201ENST00000579335 131 ntBASIC17.16■□□□□ 0.34
BARD1Q99728 AC092119.3-201ENST00000612618 583 ntBASIC17.16■□□□□ 0.34
BARD1Q99728 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.16■□□□□ 0.34
BARD1Q99728 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.16■□□□□ 0.34
BARD1Q99728 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.16■□□□□ 0.34
BARD1Q99728 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BARD1Q99728 AL645608.8-201ENST00000606034 2086 ntBASIC17.16■□□□□ 0.34
BARD1Q99728 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.16■□□□□ 0.34
BARD1Q99728 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
BARD1Q99728 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
BARD1Q99728 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.15■□□□□ 0.34
BARD1Q99728 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BARD1Q99728 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 BCL2-203ENST00000589955 5011 ntBASIC17.15■□□□□ 0.34
BARD1Q99728 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BARD1Q99728 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.15■□□□□ 0.34
BARD1Q99728 AC034232.1-201ENST00000506026 1064 ntBASIC17.15■□□□□ 0.34
BARD1Q99728 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
BARD1Q99728 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.15■□□□□ 0.34
BARD1Q99728 MIR3180-1-201ENST00000580374 94 ntBASIC17.15■□□□□ 0.34
BARD1Q99728 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.15■□□□□ 0.34
BARD1Q99728 RN7SL510P-201ENST00000581311 263 ntBASIC17.15■□□□□ 0.34
BARD1Q99728 MIR3180-3-201ENST00000584616 94 ntBASIC17.15■□□□□ 0.34
BARD1Q99728 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
BARD1Q99728 AC092329.2-201ENST00000598402 547 ntBASIC17.15■□□□□ 0.34
BARD1Q99728 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BARD1Q99728 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BARD1Q99728 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BARD1Q99728 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.14■□□□□ 0.34
BARD1Q99728 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BARD1Q99728 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 AC112777.1-201ENST00000540175 1423 ntBASIC17.14■□□□□ 0.33
BARD1Q99728 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 AC246785.2-201ENST00000432512 513 ntBASIC17.14■□□□□ 0.33
BARD1Q99728 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 AC092597.1-201ENST00000487352 616 ntBASIC17.14■□□□□ 0.33
BARD1Q99728 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.14■□□□□ 0.33
BARD1Q99728 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 AC011498.5-201ENST00000592027 486 ntBASIC17.14■□□□□ 0.33
BARD1Q99728 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.14■□□□□ 0.33
BARD1Q99728 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.14■□□□□ 0.33
BARD1Q99728 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
BARD1Q99728 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BARD1Q99728 AC016734.2-201ENST00000624325 1377 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms