Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SORT1Q99523 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SORT1Q99523 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SORT1Q99523 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.45■□□□□ 0.38
SORT1Q99523 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.45■□□□□ 0.38
SORT1Q99523 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.45■□□□□ 0.38
SORT1Q99523 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.45■□□□□ 0.38
SORT1Q99523 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.45■□□□□ 0.38
SORT1Q99523 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.45■□□□□ 0.38
SORT1Q99523 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.45■□□□□ 0.38
SORT1Q99523 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.45■□□□□ 0.38
SORT1Q99523 ITM2C-210ENST00000620962 501 ntBASIC17.45■□□□□ 0.38
SORT1Q99523 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SORT1Q99523 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SORT1Q99523 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.45■□□□□ 0.38
SORT1Q99523 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.45■□□□□ 0.38
SORT1Q99523 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SORT1Q99523 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SORT1Q99523 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.44■□□□□ 0.38
SORT1Q99523 RBM17P1-201ENST00000453646 1190 ntBASIC17.44■□□□□ 0.38
SORT1Q99523 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.44■□□□□ 0.38
SORT1Q99523 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SORT1Q99523 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SORT1Q99523 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.44■□□□□ 0.38
SORT1Q99523 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SORT1Q99523 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SORT1Q99523 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
SORT1Q99523 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.44■□□□□ 0.38
SORT1Q99523 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SORT1Q99523 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.43■□□□□ 0.38
SORT1Q99523 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 PRORSD1P-201ENST00000295112 541 ntBASIC17.43■□□□□ 0.38
SORT1Q99523 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.43■□□□□ 0.38
SORT1Q99523 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 CCR12P-201ENST00000446203 998 ntBASIC17.43■□□□□ 0.38
SORT1Q99523 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.43■□□□□ 0.38
SORT1Q99523 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.43■□□□□ 0.38
SORT1Q99523 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.43■□□□□ 0.38
SORT1Q99523 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SORT1Q99523 AP001412.1-201ENST00000608405 714 ntBASIC17.43■□□□□ 0.38
SORT1Q99523 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.43■□□□□ 0.38
SORT1Q99523 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 AC060834.1-201ENST00000443027 2032 ntBASIC17.43■□□□□ 0.38
SORT1Q99523 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 AC018695.7-201ENST00000624587 2492 ntBASIC17.43■□□□□ 0.38
SORT1Q99523 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SORT1Q99523 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SORT1Q99523 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.43■□□□□ 0.38
SORT1Q99523 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SORT1Q99523 KRT8P47-201ENST00000604727 1398 ntBASIC17.42■□□□□ 0.38
SORT1Q99523 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms