Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 AC034232.1-201ENST00000506026 1064 ntBASIC18.1■□□□□ 0.49
LRRC39Q96DD0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC39Q96DD0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 AC009949.1-201ENST00000623048 1830 ntBASIC18.09■□□□□ 0.49
LRRC39Q96DD0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRC39Q96DD0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 AP001094.4-201ENST00000579008 2176 ntBASIC18.08■□□□□ 0.49
LRRC39Q96DD0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRC39Q96DD0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
LRRC39Q96DD0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 AC024563.2-201ENST00000603282 481 ntBASIC18.08■□□□□ 0.48
LRRC39Q96DD0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC39Q96DD0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 CROCCP2-202ENST00000412962 2773 ntBASIC18.07■□□□□ 0.48
LRRC39Q96DD0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC39Q96DD0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms