Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 B3GAT3P1-201ENST00000471720 806 ntBASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 LINC01451-201ENST00000623792 534 ntBASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.77■□□□□ 0.28
SLCO4A1Q96BD0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLCO4A1Q96BD0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLCO4A1Q96BD0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AL603756.1-201ENST00000606511 2163 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 MESTP1-201ENST00000404287 994 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AC133681.1-201ENST00000465482 601 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AP000692.2-201ENST00000608391 879 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 MIR6786-201ENST00000616843 113 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 CR392000.1-201ENST00000624770 1228 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 AC073648.6-201ENST00000641589 218 ntBASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.75■□□□□ 0.27
SLCO4A1Q96BD0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms