Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF34Q969K3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF34Q969K3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
RNF34Q969K3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF34Q969K3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF34Q969K3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF34Q969K3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF34Q969K3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF34Q969K3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RNF34Q969K3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF34Q969K3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF34Q969K3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF34Q969K3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RNF34Q969K3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 AL592071.1-201ENST00000611956 408 ntBASIC18.73■□□□□ 0.59
RNF34Q969K3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 AL390961.4-201ENST00000623958 2535 ntBASIC18.73■□□□□ 0.59
RNF34Q969K3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF34Q969K3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 AL354751.1-201ENST00000412768 1863 ntBASIC18.73■□□□□ 0.59
RNF34Q969K3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF34Q969K3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
RNF34Q969K3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF34Q969K3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF34Q969K3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF34Q969K3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF34Q969K3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF34Q969K3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 AC011840.4-201ENST00000578471 627 ntBASIC18.72■□□□□ 0.59
RNF34Q969K3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 AP002414.4-201ENST00000589764 1148 ntBASIC18.72■□□□□ 0.59
RNF34Q969K3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF34Q969K3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF34Q969K3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF34Q969K3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF34Q969K3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF34Q969K3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF34Q969K3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF34Q969K3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF34Q969K3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF34Q969K3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF34Q969K3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF34Q969K3 AP000997.3-201ENST00000623333 2250 ntBASIC18.71■□□□□ 0.59
RNF34Q969K3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF34Q969K3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF34Q969K3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF34Q969K3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF34Q969K3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RNF34Q969K3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RNF34Q969K3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF34Q969K3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF34Q969K3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF34Q969K3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RNF34Q969K3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms