Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 LETM1P2-201ENST00000597330 2178 ntBASIC20.3■□□□□ 0.84
TNFRSF25Q93038 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 COX5BP2-201ENST00000392354 334 ntBASIC20.3■□□□□ 0.84
TNFRSF25Q93038 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 PP12613-201ENST00000424958 2230 ntBASIC20.3■□□□□ 0.84
TNFRSF25Q93038 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF25Q93038 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 IGHV3-47-201ENST00000425060 335 ntBASIC20.29■□□□□ 0.84
TNFRSF25Q93038 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 TOB2P1-201ENST00000469761 992 ntBASIC20.29■□□□□ 0.84
TNFRSF25Q93038 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF25Q93038 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 BX276092.7-203ENST00000637198 1536 ntBASIC20.28■□□□□ 0.84
TNFRSF25Q93038 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 AC026471.1-201ENST00000564629 3026 ntBASIC20.28■□□□□ 0.84
TNFRSF25Q93038 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TNFRSF25Q93038 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.27■□□□□ 0.84
TNFRSF25Q93038 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 HLA-J-201ENST00000462773 1622 ntBASIC20.27■□□□□ 0.84
TNFRSF25Q93038 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFRSF25Q93038 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms