Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPB3Q92617 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPB3Q92617 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPB3Q92617 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPB3Q92617 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPB3Q92617 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPB3Q92617 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPB3Q92617 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.14□□□□□ -0.15
NPIPB3Q92617 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 AC010653.2-201ENST00000623505 997 ntBASIC14.14□□□□□ -0.15
NPIPB3Q92617 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 AL023806.1-201ENST00000603994 1649 ntBASIC14.14□□□□□ -0.15
NPIPB3Q92617 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 AC100803.2-201ENST00000562459 1963 ntBASIC14.14□□□□□ -0.15
NPIPB3Q92617 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPB3Q92617 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPB3Q92617 AC132938.6-201ENST00000623828 1655 ntBASIC14.14□□□□□ -0.15
NPIPB3Q92617 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 AC080080.1-201ENST00000625121 2420 ntBASIC14.13□□□□□ -0.15
NPIPB3Q92617 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NPIPB3Q92617 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 AC008550.1-201ENST00000511500 884 ntBASIC14.13□□□□□ -0.15
NPIPB3Q92617 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.13□□□□□ -0.15
NPIPB3Q92617 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms