Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 KIRREL3-AS3-201ENST00000404882 831 ntBASIC30.54■■■□□ 2.48
TRIM41Q8WV44 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 AC069262.1-201ENST00000539058 672 ntBASIC30.54■■■□□ 2.48
TRIM41Q8WV44 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 AC093512.1-201ENST00000617969 520 ntBASIC30.54■■■□□ 2.48
TRIM41Q8WV44 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TRIM41Q8WV44 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 MINOS1P3-201ENST00000457048 203 ntBASIC30.53■■■□□ 2.48
TRIM41Q8WV44 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 MIR6752-201ENST00000618442 71 ntBASIC30.53■■■□□ 2.48
TRIM41Q8WV44 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRIM41Q8WV44 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 GAPDHP21-201ENST00000450301 1010 ntBASIC30.52■■■□□ 2.48
TRIM41Q8WV44 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 CDV3-207ENST00000508481 661 ntTSL 3 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM41Q8WV44 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
TRIM41Q8WV44 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
TRIM41Q8WV44 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
TRIM41Q8WV44 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
TRIM41Q8WV44 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
TRIM41Q8WV44 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 OR8S1-201ENST00000310194 1080 ntBASIC30.51■■■□□ 2.47
TRIM41Q8WV44 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 YBX1P5-201ENST00000509441 847 ntBASIC30.51■■■□□ 2.47
TRIM41Q8WV44 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 AP001269.4-201ENST00000609611 512 ntBASIC30.51■■■□□ 2.47
TRIM41Q8WV44 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRIM41Q8WV44 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 ELK2BP-201ENST00000415014 1224 ntBASIC30.5■■■□□ 2.47
TRIM41Q8WV44 KRT18P65-201ENST00000439811 1286 ntBASIC30.5■■■□□ 2.47
TRIM41Q8WV44 AC132008.2-207ENST00000454517 770 ntBASIC30.5■■■□□ 2.47
TRIM41Q8WV44 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 MIR5100-201ENST00000579544 119 ntBASIC30.5■■■□□ 2.47
TRIM41Q8WV44 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM41Q8WV44 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM41Q8WV44 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms