Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 AL031598.1-201ENST00000561511 1773 ntBASIC21.64■■□□□ 1.05
SNED1Q8TER0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SNED1Q8TER0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SNED1Q8TER0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNED1Q8TER0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 SIRPAP1-201ENST00000448467 1770 ntBASIC21.63■■□□□ 1.05
SNED1Q8TER0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 CROCCP3-202ENST00000420820 1947 ntBASIC21.63■■□□□ 1.05
SNED1Q8TER0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNED1Q8TER0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 RHOQP3-201ENST00000437982 621 ntBASIC21.63■■□□□ 1.05
SNED1Q8TER0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.63■■□□□ 1.05
SNED1Q8TER0 AC093028.1-201ENST00000622998 982 ntBASIC21.63■■□□□ 1.05
SNED1Q8TER0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 KLF4P1-201ENST00000412782 1185 ntBASIC21.62■■□□□ 1.05
SNED1Q8TER0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 AP000344.2-201ENST00000512987 629 ntBASIC21.62■■□□□ 1.05
SNED1Q8TER0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 KRT19P2-202ENST00000557173 1012 ntBASIC21.62■■□□□ 1.05
SNED1Q8TER0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.62■■□□□ 1.05
SNED1Q8TER0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNED1Q8TER0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.61■■□□□ 1.05
SNED1Q8TER0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 AC106028.4-201ENST00000614509 607 ntBASIC21.61■■□□□ 1.05
SNED1Q8TER0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNED1Q8TER0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.61■■□□□ 1.05
SNED1Q8TER0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.6■■□□□ 1.05
SNED1Q8TER0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.6■■□□□ 1.05
SNED1Q8TER0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNED1Q8TER0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms